BOA: A PARTITIONED VIEW OF GENOME ASSEMBLY

BOA: A partitioned view of genome assembly

Summary: De novo genome assembly is a fundamental problem in computational molecular biology that aims to reconstruct an unknown genome sequence from a set of short DNA sequences (or reads) obtained from the genome.The relative ordering of the reads along the target genome is not known a priori, which is one of the main contributors to the increase

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TMBcat: A multi-endpoint p-value criterion on different discrepancy metrics for superiorly inferring tumor mutation burden thresholds

Tumor mutation burden (TMB) is a widely recognized stratification biomarker for predicting the efficacy Double clip of immunotherapy; however, the number and universal definition of the categorizing thresholds remain debatable due to the multifaceted nature of efficacy and the imprecision of TMB measurements.We proposed a minimal joint p-value crit

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